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Solid phase synthesis of peptides containing novel amino acids, substituted 3-benzimidazolealanines

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Abstract

A direct solid-phase synthesis of a series of substituted benzimidazole-containing peptides is described. The method involves on-resin formation of new amino acids containing benzimidazole derivatives in the side chain. The heterocycle conjugates were obtained by reaction between aldehydes and peptides containing β-(3,4-diaminophenyl)alanine residue, immobilized on a polymeric solid support.

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References

  • Alamgir M, Black DSC, Kumar N (2007) Synthesis, reactivity and biological activity of benzimidazoles. Top Heterocycl Chem 9:87–118

    Article  CAS  Google Scholar 

  • Atherton E, Scheppart RC (1989) Solid phase peptide synthesis. IRL Press, Oxford

    Google Scholar 

  • Bendale PM, Sun CM (2002) Rapid microwave-assisted liquid-phase combinatorial synthesis of 2-(arylamino)benzimidazoles. J Comb Chem 4:359–361

    Article  PubMed  CAS  Google Scholar 

  • Bendsoe N, Ronquist G (2004) Inhibition of the l-dopa transport system in human epidermal Langerhans cells by omeprazole and its analogues. Amino Acids 26:19–26

    Article  PubMed  CAS  Google Scholar 

  • Devereux M, O’Shea D, Kellett A, McCann M, Walsh M, Egan D, Deegan C, Kedziora K, Rosair G, Muller-Bunz H (2007) Synthesis, X-ray crystal structures and biomimetic and anticancer activities of novel copper(II)benzoate complexes incorporating 2-(4′-thiazolyl)benzimidazole (thiabendazole), 2-(2-pyridyl)benzimidazole and 1,10-phenanthroline as chelating nitrogen donor ligands. J Inorg Biochem 101:881–892

    Article  PubMed  CAS  Google Scholar 

  • Frochot C, Di Stasio B, Vanderesse R, Belgy MJ, Dodeller M, Guillemin F, Viriot ML, Barberi-Heyo M (2007) Interest of RGD-containing linear or cyclic peptide targeted tetraphenylchlorin as novel photosensitizers for selective photodynamic activity. Bioorg Chem 35:205–220

    Article  PubMed  CAS  Google Scholar 

  • Hines AC, Parang K, Kohanski RA, Hubbard SR, Cole PA (2005) Bisubstrate analog probes for the insulin receptor protein tyrosine kinase: molecular yardsticks for analyzing catalytic mechanism and inhibitor design. Bioorg Chem 33:285–297

    Article  PubMed  CAS  Google Scholar 

  • Huang W, Scarborough RM (1999) A new “traceless” solid-phase synthesis strategy: synthesis of a benzimidazole library. Tetrahedron Lett 40:2665–2668

    Google Scholar 

  • Kotha S, Shah VR, Mishra P, Datta A (2007) Design and synthesis of a novel anthracene-based fluorescent probe through the application of the Suzuki–Miyaura cross-coupling reaction. Amino Acids (in press). (doi:10.1007/s00726-007-0592-2)

  • Lin LS, Lanza TJ, Castonguay LA, Kamenecka T, McCauley E, Van Riper G, Egger LA, Mumford RA, Tong X, MacCoss M, Schmidt JA, Halmann WK (2004) Bioisosteric replacement of anilide with benzoxazole: potent and orally bioavailable antagonists of VLA-4. Bioorg Med Chem Lett 14:2331–2334

    Article  PubMed  CAS  Google Scholar 

  • Lucchese G, Stufano A, Trost B, Kusalik A, Kanduc D (2006) Peptidology: short amino acid modules in cell biology and immunology. Amino Acids 33:703–707

    Article  PubMed  CAS  Google Scholar 

  • Mayer JP, Lewis GS, McGee C, Bankaitis-Davis D (1998) Solid-phase synthesis of benzimidazoles. Tetrahedron Lett 39:6655–6658

    Article  CAS  Google Scholar 

  • McGrath ME, Sprengeler PA, Hirschbein B, Somoza JR, Lehoux I, Janc JW, Gjerstad E, Graupe M, Estiarte A, Venkataramani C, Liu Y, Yee R, Ho JD, Green MJ, Lee CS, Liu L, Tai V, Spencer J, Sperandio D, Katz BA (2006) Structure-guided design of peptide-based tryptase inhibitors. Biochemistry 45:5964–5973

    Article  PubMed  CAS  Google Scholar 

  • Milkowski JD, Miller FM, Johnson EM Jr, Zenker N (1970) Benzimidazole-5(6)-alanine and related compounds. 1. Synthesis of amino acids as inhibitors of norepinephrine biosynthesis. J Med Chem 13:741–742

    Article  PubMed  CAS  Google Scholar 

  • Staszewska A, Stefanowicz P, Szewczuk Z (2005) Direct solid-phase synthesis of quinoxaline-containing peptides. Tetrahedron Lett 46:5525–5528

    Article  CAS  Google Scholar 

  • Stefanowicz P, Boratyński PJ, Staszewska A, Siemion IZ, Zimecki M, Szewczuk Z (2004) Threonine at position 6 is not essential for the immunosuppressive activity of HLA-DQ(beta164–172)-hexapeptide. Mol Immunol 41:911–917

    Article  PubMed  CAS  Google Scholar 

  • Stefanowicz P, Jaremko L, Jaremko M, Staszewska A, Szewczuk Z, Bryndal I, Lis T (2006) (2S)-3-(4-Amino-3-nitrophenyl)-2-(9H-fluoren-9-ylmethoxycarbonylamino)propanoic acid dichloromethane disolvate. Acta Cryst E62:o3555–o3557

    CAS  Google Scholar 

  • Stefanowicz P, Kapczynska K, Kluczyk A, Szewczuk Z (2007a) A new procedure for the synthesis of peptide-derived Amadori products on a solid support. Tetrahedron Lett 48:967–969

    Article  CAS  Google Scholar 

  • Stefanowicz P, Staszewska A, Kluczyk A, Zimecki M, Szewczuk Z (2007b) Immunomodulatory properties and fragmentation pathways of quinoxaline-containing peptides. In: 2nd European conference on chemistry for life sciences, 4–8 September, Wroclaw, Poland, p 299

  • Stone CA (1979) Antihypertensive compositions containing an aryl-substituted alanine azo and an arylhydrazino-propionic acid. U.S. Patent 4,156,734; Chem Abstr 91:211822

  • Szczepanik W, Staszewska A, Kucharczyk M, Stefanowicz P, Szewczuk Z, Jeżowska-Bojczuk M (2007) Peptides containing derivatives of 3-(quinoxaline-6-yl)-alanine in the presence of Cu2+ and Fe2+ ions are effective DNA cleaving agents. In: 2nd European conference on chemistry for life sciences, 4–8 September, Wroclaw, Poland, p 304

  • Szewczuk Z, Stefanowicz P, Wilczyński A, Siemion IZ, Cierniewski CS, Kralisz U, Wieczorek Z (1996) The immunosuppressory and adhesive miniregion of the human major histocompatibility protein, human leukocyte antigen DQ. Biopolymers 40:571–583

    Article  PubMed  CAS  Google Scholar 

  • Szewczuk Z, Stefanowicz P, Wilczyński A, Staszewska A, Siemion IZ, Zimecki M, Wieczorek Z (2004) Immunosuppressory activity of ubiquitin fragments containing retro-RGD sequence. Biopolymers 74:352–362

    Article  PubMed  CAS  Google Scholar 

  • Wu CY, Sun CM (2002) Soluble polymer-supported synthesis of 2-(arylamino)benzimidazoles. Tetrahedron Lett 43:1529–1533

    Article  CAS  Google Scholar 

  • Wu Z, Rea P, Wickham G (2000) ‘One-pot’ nitro reduction–cyclisation solid phase route to benzimidazoles. Tetrahedron Lett 41:9871–9874

    Article  CAS  Google Scholar 

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Acknowledgments

This work was supported in part by grants No. 3 T09A 029 28 and N N204 249934 from the State Committee for Scientific Research (Poland). We thank Dr. Anna Staszewska for technical assistance.

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Correspondence to Zbigniew Szewczuk.

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Koprowska-Ratajska, M., Kluczyk, A., Stefanowicz, P. et al. Solid phase synthesis of peptides containing novel amino acids, substituted 3-benzimidazolealanines. Amino Acids 36, 309–315 (2009). https://doi.org/10.1007/s00726-008-0070-5

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  • DOI: https://doi.org/10.1007/s00726-008-0070-5

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